Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AL390754.1-201ENST00000619088 582 ntBASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AC073592.8-201ENST00000624126 511 ntBASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 CETN4P-206ENST00000642099 2168 ntBASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 FO538757.1-201ENST00000623083 1397 ntBASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 AL589739.1-201ENST00000607720 493 ntBASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHMP1BQ7LBR1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHMP1BQ7LBR1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms