Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.15□□□□□ -0.15
NHLRC1Q6VVB1 TUBB3P1-201ENST00000405796 1332 ntBASIC14.15□□□□□ -0.15
NHLRC1Q6VVB1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NHLRC1Q6VVB1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 AL607033.1-201ENST00000623900 1599 ntBASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 CICP4-201ENST00000447359 2812 ntBASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 MTND6P24-201ENST00000440466 518 ntBASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 AC023908.3-201ENST00000564211 3047 ntBASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NHLRC1Q6VVB1 AC104581.4-201ENST00000623126 3052 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 SSR4P1-203ENST00000599569 2260 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC074338.1-201ENST00000416825 156 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 TARDBPP1-201ENST00000442013 1203 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC025678.2-201ENST00000562061 970 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AL589739.1-201ENST00000607720 493 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC009090.5-201ENST00000624886 2285 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 AC092127.1-201ENST00000567093 3455 ntBASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NHLRC1Q6VVB1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms