Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKAL1Q5VV42 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDKAL1Q5VV42 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CDKAL1Q5VV42 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 AL671883.3-201ENST00000603274 991 ntBASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 AC140479.7-201ENST00000636301 2332 ntBASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKAL1Q5VV42 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 AC015910.1-201ENST00000579400 975 ntBASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 AC003101.2-201ENST00000612557 442 ntBASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDKAL1Q5VV42 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms