Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 RPS2P28-201ENST00000314255 741 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 RNU1-129P-201ENST00000384064 167 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AC136632.2-201ENST00000512891 861 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 U1.21-201ENST00000580816 167 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AL031055.1-201ENST00000606362 631 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AC008735.5-201ENST00000623544 497 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 AL390755.1-201ENST00000623716 2027 ntBASIC12.55□□□□□ -0.4
FAM78BQ5VT40 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 KRT18P67-201ENST00000432816 1264 ntBASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 FAAHP1-202ENST00000446499 1238 ntBASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 MIR4515-201ENST00000584082 81 ntBASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AC112693.3-201ENST00000624819 1983 ntBASIC12.55□□□□□ -0.4
FAM78BQ5VT40 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AC041040.2-201ENST00000622926 2899 ntBASIC12.55□□□□□ -0.4
FAM78BQ5VT40 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.55□□□□□ -0.4
FAM78BQ5VT40 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms