Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP1Q04837 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP1Q04837 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP1Q04837 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP1Q04837 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP1Q04837 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP1Q04837 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SSBP1Q04837 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP1Q04837 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.31□□□□□ -0.28
SSBP1Q04837 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SSBP1Q04837 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP1Q04837 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP1Q04837 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SSBP1Q04837 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP1Q04837 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP1Q04837 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SSBP1Q04837 AC005252.3-201ENST00000623855 2258 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP1Q04837 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.3□□□□□ -0.28
SSBP1Q04837 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP1Q04837 RPS8P6-201ENST00000426177 609 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 GHSR-202ENST00000427970 912 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 PRSS29P-201ENST00000440800 595 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 EEF1DP4-201ENST00000446006 880 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP1Q04837 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SSBP1Q04837 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP1Q04837 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 AC061975.2-201ENST00000581722 295 ntBASIC13.3□□□□□ -0.28
SSBP1Q04837 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms