Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PSMD4P55036 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.68□□□□□ -0.06
PSMD4P55036 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.68□□□□□ -0.06
PSMD4P55036 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.68□□□□□ -0.06
PSMD4P55036 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.68□□□□□ -0.06
PSMD4P55036 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PSMD4P55036 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.67□□□□□ -0.06
PSMD4P55036 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.67□□□□□ -0.06
PSMD4P55036 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 AC027369.6-201ENST00000525520 931 ntBASIC14.67□□□□□ -0.06
PSMD4P55036 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.67□□□□□ -0.06
PSMD4P55036 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.67□□□□□ -0.06
PSMD4P55036 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.67□□□□□ -0.06
PSMD4P55036 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.67□□□□□ -0.06
PSMD4P55036 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PSMD4P55036 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.67□□□□□ -0.06
PSMD4P55036 AP003680.1-201ENST00000598970 3660 ntBASIC14.67□□□□□ -0.06
PSMD4P55036 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PSMD4P55036 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PSMD4P55036 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.66□□□□□ -0.06
PSMD4P55036 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 AC020658.6-201ENST00000623564 1870 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PSMD4P55036 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PSMD4P55036 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PSMD4P55036 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
PSMD4P55036 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PSMD4P55036 AL080243.2-201ENST00000418783 582 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 AC092183.1-201ENST00000469884 875 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.66□□□□□ -0.06
PSMD4P55036 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 RN7SL618P-201ENST00000477850 296 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.66□□□□□ -0.06
PSMD4P55036 IGHV3-42-201ENST00000520410 361 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.66□□□□□ -0.06
PSMD4P55036 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 SPDYE12P-201ENST00000618416 771 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.66□□□□□ -0.06
PSMD4P55036 AL033527.5-202ENST00000641632 1098 ntBASIC14.66□□□□□ -0.06
PSMD4P55036 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PSMD4P55036 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PSMD4P55036 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PSMD4P55036 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PSMD4P55036 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.66□□□□□ -0.06
PSMD4P55036 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.66□□□□□ -0.06
PSMD4P55036 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
PSMD4P55036 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PSMD4P55036 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms