Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EPHB4P54760 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHB4P54760 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHB4P54760 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
EPHB4P54760 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 GPAA1P2-201ENST00000417923 928 ntBASIC17.66■□□□□ 0.42
EPHB4P54760 HIST3H2BA-201ENST00000436555 524 ntBASIC17.66■□□□□ 0.42
EPHB4P54760 FO681548.1-201ENST00000455617 1132 ntBASIC17.66■□□□□ 0.42
EPHB4P54760 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 RN7SL399P-201ENST00000471648 279 ntBASIC17.66■□□□□ 0.42
EPHB4P54760 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.66■□□□□ 0.42
EPHB4P54760 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.66■□□□□ 0.42
EPHB4P54760 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.66■□□□□ 0.42
EPHB4P54760 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 AC013467.2-201ENST00000605472 835 ntBASIC17.66■□□□□ 0.42
EPHB4P54760 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 DBET-201ENST00000630918 3363 ntBASIC17.66■□□□□ 0.42
EPHB4P54760 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EPHB4P54760 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
EPHB4P54760 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHB4P54760 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
EPHB4P54760 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
EPHB4P54760 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
EPHB4P54760 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHB4P54760 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHB4P54760 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB4P54760 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 FAM21FP-201ENST00000426241 1131 ntBASIC17.65■□□□□ 0.42
EPHB4P54760 ACTG1P3-201ENST00000431775 1114 ntBASIC17.65■□□□□ 0.42
EPHB4P54760 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 RNA5SP423-201ENST00000517127 109 ntBASIC17.65■□□□□ 0.42
EPHB4P54760 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.65■□□□□ 0.42
EPHB4P54760 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHB4P54760 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB4P54760 AC243960.2-201ENST00000600996 747 ntBASIC17.65■□□□□ 0.42
EPHB4P54760 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
EPHB4P54760 AC020765.3-201ENST00000613051 740 ntBASIC17.65■□□□□ 0.42
EPHB4P54760 AC144831.1-201ENST00000573312 2656 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms