Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.66■□□□□ 0.42
USP11P51784 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.66■□□□□ 0.42
USP11P51784 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.66■□□□□ 0.42
USP11P51784 AP005018.1-201ENST00000525475 301 ntBASIC17.66■□□□□ 0.42
USP11P51784 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.66■□□□□ 0.42
USP11P51784 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
USP11P51784 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.66■□□□□ 0.42
USP11P51784 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.66■□□□□ 0.42
USP11P51784 AC105233.6-201ENST00000642093 218 ntBASIC17.66■□□□□ 0.42
USP11P51784 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
USP11P51784 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 TMBIM7P-203ENST00000641617 1718 ntBASIC17.66■□□□□ 0.42
USP11P51784 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.66■□□□□ 0.42
USP11P51784 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.65■□□□□ 0.42
USP11P51784 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USP11P51784 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP11P51784 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 AC134915.1-201ENST00000426461 574 ntBASIC17.65■□□□□ 0.42
USP11P51784 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.65■□□□□ 0.42
USP11P51784 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.65■□□□□ 0.42
USP11P51784 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 AL596325.1-201ENST00000563991 1082 ntBASIC17.65■□□□□ 0.42
USP11P51784 WASH4P-201ENST00000564273 1246 ntBASIC17.65■□□□□ 0.42
USP11P51784 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP11P51784 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
USP11P51784 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP11P51784 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP11P51784 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
USP11P51784 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.64■□□□□ 0.42
USP11P51784 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 VDAC1P7-201ENST00000462417 847 ntBASIC17.64■□□□□ 0.41
USP11P51784 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.64■□□□□ 0.41
USP11P51784 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.64■□□□□ 0.41
USP11P51784 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP11P51784 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP11P51784 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.64■□□□□ 0.41
USP11P51784 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.64■□□□□ 0.41
USP11P51784 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 LINC00554-201ENST00000564841 3011 ntBASIC17.64■□□□□ 0.41
USP11P51784 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.64■□□□□ 0.41
USP11P51784 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.64■□□□□ 0.41
USP11P51784 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP11P51784 SSR4P1-203ENST00000599569 2260 ntBASIC17.64■□□□□ 0.41
USP11P51784 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms