Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC068418.2-201ENST00000577309 3703 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.21□□□□□ -0.14
APOBEC1P41238 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.21□□□□□ -0.14
APOBEC1P41238 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOBEC1P41238 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.21□□□□□ -0.14
APOBEC1P41238 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
APOBEC1P41238 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 RPL5P21-201ENST00000404620 815 ntBASIC14.2□□□□□ -0.14
APOBEC1P41238 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.2□□□□□ -0.14
APOBEC1P41238 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 AC092337.1-201ENST00000568699 1129 ntBASIC14.2□□□□□ -0.14
APOBEC1P41238 AC027796.2-201ENST00000575326 344 ntBASIC14.2□□□□□ -0.14
APOBEC1P41238 AC004461.2-201ENST00000629517 803 ntBASIC14.2□□□□□ -0.14
APOBEC1P41238 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
APOBEC1P41238 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBEC1P41238 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.2□□□□□ -0.14
APOBEC1P41238 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBEC1P41238 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOBEC1P41238 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 AC136621.1-201ENST00000624017 2304 ntBASIC14.19□□□□□ -0.14
APOBEC1P41238 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
APOBEC1P41238 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.19□□□□□ -0.14
APOBEC1P41238 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.19□□□□□ -0.14
APOBEC1P41238 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.19□□□□□ -0.14
APOBEC1P41238 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 AC135586.1-201ENST00000539323 574 ntBASIC14.19□□□□□ -0.14
APOBEC1P41238 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.19□□□□□ -0.14
APOBEC1P41238 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.19□□□□□ -0.14
APOBEC1P41238 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms