Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.15□□□□□ -0.62
TMEM238C9JI98 MROH4P-201ENST00000431302 1578 ntBASIC11.15□□□□□ -0.62
TMEM238C9JI98 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TMEM238C9JI98 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.15□□□□□ -0.62
TMEM238C9JI98 AC013726.1-201ENST00000563747 2285 ntBASIC11.15□□□□□ -0.62
TMEM238C9JI98 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TMEM238C9JI98 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TMEM238C9JI98 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TMEM238C9JI98 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
TMEM238C9JI98 PCGF3-213ENST00000620529 1899 ntBASIC11.15□□□□□ -0.63
TMEM238C9JI98 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TMEM238C9JI98 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.15□□□□□ -0.63
TMEM238C9JI98 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RASA4DP-201ENST00000460726 1199 ntBASIC11.14□□□□□ -0.63
TMEM238C9JI98 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AP003733.1-201ENST00000491725 852 ntBASIC11.14□□□□□ -0.63
TMEM238C9JI98 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AC112176.1-201ENST00000565428 3024 ntBASIC11.14□□□□□ -0.63
TMEM238C9JI98 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 AL049757.1-201ENST00000616842 1596 ntBASIC11.14□□□□□ -0.63
TMEM238C9JI98 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TMEM238C9JI98 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
TMEM238C9JI98 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.13□□□□□ -0.63
TMEM238C9JI98 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.13□□□□□ -0.63
TMEM238C9JI98 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TMEM238C9JI98 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.13□□□□□ -0.63
TMEM238C9JI98 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC11.13□□□□□ -0.63
TMEM238C9JI98 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
TMEM238C9JI98 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms