Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRRM4A7MD48 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRRM4A7MD48 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.67□□□□□ -0.38
SRRM4A7MD48 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRRM4A7MD48 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SRRM4A7MD48 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRRM4A7MD48 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRRM4A7MD48 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.67□□□□□ -0.38
SRRM4A7MD48 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRRM4A7MD48 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AP006288.1-201ENST00000446065 395 ntBASIC12.66□□□□□ -0.38
SRRM4A7MD48 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AL079307.3-201ENST00000556114 283 ntBASIC12.66□□□□□ -0.38
SRRM4A7MD48 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.66□□□□□ -0.38
SRRM4A7MD48 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 AC126365.1-201ENST00000578585 1514 ntBASIC12.66□□□□□ -0.38
SRRM4A7MD48 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
SRRM4A7MD48 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SRRM4A7MD48 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 SPDYE7P-202ENST00000420373 878 ntBASIC12.65□□□□□ -0.38
SRRM4A7MD48 TARDBPP1-201ENST00000442013 1203 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms