Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 SPDYE17-201ENST00000412399 783 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 TSSK5P-201ENST00000423978 907 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AC004890.2-204ENST00000481968 304 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AL512361.1-201ENST00000554200 418 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 LINC02560-201ENST00000596379 459 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AC010491.1-201ENST00000563101 2797 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 KRT8P37-201ENST00000451609 1420 ntBASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 MIR6069-201ENST00000620069 79 ntBASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 AL033527.5-202ENST00000641632 1098 ntBASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 AC022144.1-201ENST00000602255 1580 ntBASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPH3AQ9Y2J0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 AL844908.2-201ENST00000609461 460 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms