Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 AL805961.1-202ENST00000641562 540 ntBASIC15.32■□□□□ 0.04
RNF217Q8TC41 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF217Q8TC41 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF217Q8TC41 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 EMBP1-201ENST00000458200 901 ntBASIC15.31■□□□□ 0.04
RNF217Q8TC41 AF186996.4-201ENST00000467186 377 ntBASIC15.31■□□□□ 0.04
RNF217Q8TC41 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 SLC25A6P2-201ENST00000497974 877 ntBASIC15.31■□□□□ 0.04
RNF217Q8TC41 AC136632.2-201ENST00000512891 861 ntBASIC15.31■□□□□ 0.04
RNF217Q8TC41 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 GGTLC5P-201ENST00000617623 998 ntBASIC15.31■□□□□ 0.04
RNF217Q8TC41 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF217Q8TC41 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF217Q8TC41 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms