Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 RBM17P3-201ENST00000417687 1192 ntBASIC12.61□□□□□ -0.39
KHDC3LQ587J8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 AP002383.4-201ENST00000442518 975 ntBASIC12.61□□□□□ -0.39
KHDC3LQ587J8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 NKAPP1-205ENST00000585790 367 ntBASIC12.61□□□□□ -0.39
KHDC3LQ587J8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
KHDC3LQ587J8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC245100.5-201ENST00000452108 331 ntBASIC12.6□□□□□ -0.39
KHDC3LQ587J8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC106795.1-205ENST00000512851 1056 ntBASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 AC004706.3-202ENST00000621574 984 ntBASIC12.6□□□□□ -0.39
KHDC3LQ587J8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 ZBED1P1-201ENST00000502364 1930 ntBASIC12.6□□□□□ -0.39
KHDC3LQ587J8 MBLAC2-202ENST00000514906 1936 ntBASIC12.6□□□□□ -0.39
KHDC3LQ587J8 BX640514.1-201ENST00000583223 1918 ntBASIC12.6□□□□□ -0.39
KHDC3LQ587J8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KHDC3LQ587J8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KHDC3LQ587J8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms