Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC092902.6-201ENST00000641783 218 ntBASIC14.03□□□□□ -0.16
EFNB1P98172 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
EFNB1P98172 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 HSPA7-201ENST00000445535 1927 ntBASIC14.03□□□□□ -0.16
EFNB1P98172 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 AC041040.2-201ENST00000622926 2899 ntBASIC14.03□□□□□ -0.16
EFNB1P98172 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.02□□□□□ -0.16
EFNB1P98172 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.02□□□□□ -0.16
EFNB1P98172 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.02□□□□□ -0.16
EFNB1P98172 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.02□□□□□ -0.16
EFNB1P98172 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.02□□□□□ -0.16
EFNB1P98172 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.02□□□□□ -0.16
EFNB1P98172 MTHFR-210ENST00000641407 2387 ntBASIC14.02□□□□□ -0.16
EFNB1P98172 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.02□□□□□ -0.16
EFNB1P98172 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
EFNB1P98172 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
EFNB1P98172 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.02□□□□□ -0.16
EFNB1P98172 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.02□□□□□ -0.16
EFNB1P98172 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB1P98172 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
EFNB1P98172 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
EFNB1P98172 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
EFNB1P98172 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNB1P98172 FO393414.2-201ENST00000405153 598 ntBASIC14.02□□□□□ -0.17
EFNB1P98172 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB1P98172 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.02□□□□□ -0.17
EFNB1P98172 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB1P98172 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.02□□□□□ -0.17
EFNB1P98172 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.02□□□□□ -0.17
EFNB1P98172 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB1P98172 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB1P98172 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
EFNB1P98172 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNB1P98172 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
EFNB1P98172 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB1P98172 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
EFNB1P98172 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
EFNB1P98172 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
EFNB1P98172 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNB1P98172 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNB1P98172 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
EFNB1P98172 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNB1P98172 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB1P98172 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
EFNB1P98172 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
EFNB1P98172 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB1P98172 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNB1P98172 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms