Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.02□□□□□ -0.01
NR1H2P55055 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NR1H2P55055 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
NR1H2P55055 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.02□□□□□ -0.01
NR1H2P55055 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.02□□□□□ -0.01
NR1H2P55055 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.02□□□□□ -0.01
NR1H2P55055 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR1H2P55055 AC090616.6-203ENST00000579186 1945 ntBASIC15.02□□□□□ -0.01
NR1H2P55055 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NR1H2P55055 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 AC148477.4-201ENST00000613430 1793 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NR1H2P55055 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
NR1H2P55055 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 LINC00982-205ENST00000420957 435 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 PMS2P2-201ENST00000425039 1128 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 ACTG1P4-201ENST00000425123 1122 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.01□□□□□ -0.01
NR1H2P55055 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.01□□□□□ -0.01
NR1H2P55055 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.01□□□□□ -0.01
NR1H2P55055 AC027796.2-201ENST00000575326 344 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 AL355385.1-201ENST00000606123 409 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 AL353135.1-201ENST00000606729 504 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.01□□□□□ -0.01
NR1H2P55055 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NR1H2P55055 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.01□□□□□ -0.01
NR1H2P55055 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR1H2P55055 REXO1L2P-201ENST00000425429 2069 ntBASIC15.01□□□□□ -0.01
NR1H2P55055 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15□□□□□ -0.01
NR1H2P55055 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15□□□□□ -0.01
NR1H2P55055 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms