Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.95□□□□□ -0.02
PTPN6P29350 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTPN6P29350 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTPN6P29350 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.95□□□□□ -0.02
PTPN6P29350 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTPN6P29350 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.94□□□□□ -0.02
PTPN6P29350 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.94□□□□□ -0.02
PTPN6P29350 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.94□□□□□ -0.02
PTPN6P29350 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 HLA-H-201ENST00000383620 1096 ntBASIC14.94□□□□□ -0.02
PTPN6P29350 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.94□□□□□ -0.02
PTPN6P29350 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.94□□□□□ -0.02
PTPN6P29350 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.94□□□□□ -0.02
PTPN6P29350 AL139010.1-201ENST00000454878 894 ntBASIC14.94□□□□□ -0.02
PTPN6P29350 RFPL4AP1-201ENST00000530883 850 ntBASIC14.94□□□□□ -0.02
PTPN6P29350 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.94□□□□□ -0.02
PTPN6P29350 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.94□□□□□ -0.02
PTPN6P29350 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.94□□□□□ -0.02
PTPN6P29350 AC027796.2-201ENST00000575326 344 ntBASIC14.94□□□□□ -0.02
PTPN6P29350 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.94□□□□□ -0.02
PTPN6P29350 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.94□□□□□ -0.02
PTPN6P29350 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.94□□□□□ -0.02
PTPN6P29350 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PTPN6P29350 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.94□□□□□ -0.02
PTPN6P29350 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTPN6P29350 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.94□□□□□ -0.02
PTPN6P29350 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 AC023024.2-201ENST00000623561 1993 ntBASIC14.93□□□□□ -0.02
PTPN6P29350 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PTPN6P29350 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.93□□□□□ -0.02
PTPN6P29350 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PTPN6P29350 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 AC136604.1-201ENST00000418535 575 ntBASIC14.93□□□□□ -0.02
PTPN6P29350 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PTPN6P29350 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 AC015911.4-201ENST00000588022 1070 ntBASIC14.93□□□□□ -0.02
PTPN6P29350 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTPN6P29350 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
PTPN6P29350 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTPN6P29350 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms