Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.834e-15■□□□□ 11.1
RPS3P23396 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.662e-10■□□□□ 11.1
RPS3P23396 FBXO17-203ENST00000596025 935 ntTSL 219.15■□□□□ 0.662e-10■□□□□ 11.1
RPS3P23396 MGAT4B-203ENST00000518168 1013 ntTSL 218.47■□□□□ 0.554e-15■□□□□ 11.1
RPS3P23396 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.397e-20■□□□□ 11.1
RPS3P23396 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.272e-10■□□□□ 11.1
RPS3P23396 FBXO17-207ENST00000601394 2366 ntTSL 514.96□□□□□ -0.012e-10■□□□□ 11.1
RPS3P23396 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.134e-6■□□□□ 11.1
RPS3P23396 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.192e-10■□□□□ 11.1
RPS3P23396 COL9A2-207ENST00000482722 2887 ntTSL 1 (best)13.65□□□□□ -0.224e-6■□□□□ 11.1
RPS3P23396 SND1-203ENST00000463020 793 ntTSL 214.79□□□□□ -0.043e-10■□□□□ 11.1
RPS3P23396 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.72e-6■□□□□ 11.1
RPS3P23396 NDUFV1-227ENST00000534139 626 ntTSL 321.16■□□□□ 0.984e-9■□□□□ 11
RPS3P23396 NDUFV1-217ENST00000530014 766 ntTSL 520.52■□□□□ 0.884e-9■□□□□ 11
RPS3P23396 NDUFV1-225ENST00000533075 582 ntTSL 319.67■□□□□ 0.744e-9■□□□□ 11
RPS3P23396 NDUFV1-205ENST00000525086 575 ntTSL 418.78■□□□□ 0.64e-9■□□□□ 11
RPS3P23396 NDUFV1-218ENST00000530103 544 ntTSL 518.78■□□□□ 0.64e-9■□□□□ 11
RPS3P23396 NDUFV1-221ENST00000532244 786 ntTSL 218.23■□□□□ 0.514e-9■□□□□ 11
RPS3P23396 NDUFV1-219ENST00000530638 582 ntTSL 516.86■□□□□ 0.294e-9■□□□□ 11
RPS3P23396 NDUFV1-203ENST00000524838 1200 ntTSL 1 (best)15.37■□□□□ 0.054e-9■□□□□ 11
RPS3P23396 NDUFV1-215ENST00000529867 582 ntTSL 313.07□□□□□ -0.324e-9■□□□□ 11
RPS3P23396 NDUFV1-224ENST00000532343 620 ntTSL 313.07□□□□□ -0.324e-9■□□□□ 11
RPS3P23396 ATP6V0B-209ENST00000496131 962 ntTSL 313.27□□□□□ -0.296e-9■□□□□ 11
RPS3P23396 SLC39A14-210ENST00000520832 578 ntTSL 47.53□□□□□ -1.28e-39■□□□□ 11
RPS3P23396 DLD-211ENST00000485066 483 ntTSL 518.85■□□□□ 0.613e-6■□□□□ 11
RPS3P23396 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.373e-12■□□□□ 11
RPS3P23396 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC12.23□□□□□ -0.453e-12■□□□□ 11
RPS3P23396 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC11.58□□□□□ -0.563e-12■□□□□ 11
RPS3P23396 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.723e-12■□□□□ 11
RPS3P23396 HNRNPC-232ENST00000557442 1308 ntTSL 210.35□□□□□ -0.753e-12■□□□□ 11
RPS3P23396 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC10.21□□□□□ -0.783e-12■□□□□ 11
RPS3P23396 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC10.05□□□□□ -0.83e-12■□□□□ 11
RPS3P23396 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC9.91□□□□□ -0.823e-12■□□□□ 11
RPS3P23396 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC9.68□□□□□ -0.863e-12■□□□□ 11
RPS3P23396 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC9.41□□□□□ -0.93e-12■□□□□ 11
RPS3P23396 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.75□□□□□ -1.013e-12■□□□□ 11
RPS3P23396 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.053e-12■□□□□ 11
RPS3P23396 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.35□□□□□ -1.073e-12■□□□□ 11
RPS3P23396 HNRNPC-212ENST00000554539 748 ntTSL 57.94□□□□□ -1.143e-12■□□□□ 11
RPS3P23396 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.4□□□□□ -1.223e-12■□□□□ 11
RPS3P23396 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.419e-10■□□□□ 11
RPS3P23396 DHX15-207ENST00000511553 532 ntTSL 419.65■□□□□ 0.747e-16■□□□□ 11
RPS3P23396 DHX15-210ENST00000513092 567 ntTSL 415.58■□□□□ 0.087e-16■□□□□ 11
RPS3P23396 PTPA-224ENST00000453358 548 ntTSL 412.22□□□□□ -0.454e-6■□□□□ 11
RPS3P23396 PTPA-211ENST00000417504 567 ntTSL 48□□□□□ -1.134e-6■□□□□ 11
RPS3P23396 CPSF1-214ENST00000622776 1029 ntTSL 522.68■■□□□ 1.225e-7■□□□□ 11
RPS3P23396 CPSF1-208ENST00000532560 701 ntTSL 314.7□□□□□ -0.065e-7■□□□□ 11
RPS3P23396 RPL10-217ENST00000492572 1656 ntTSL 517.12■□□□□ 0.335e-17■□□□□ 11
RPS3P23396 RPL10-210ENST00000458500 585 ntTSL 1 (best)12.93□□□□□ -0.345e-17■□□□□ 11
RPS3P23396 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.365e-17■□□□□ 11
RPS3P23396 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.47□□□□□ -0.415e-17■□□□□ 11
RPS3P23396 RPL10-215ENST00000489200 1519 ntTSL 212□□□□□ -0.495e-17■□□□□ 11
RPS3P23396 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.525e-17■□□□□ 11
RPS3P23396 RPL10-207ENST00000436473 657 ntTSL 211.59□□□□□ -0.555e-17■□□□□ 11
RPS3P23396 RPL10-214ENST00000485196 839 ntTSL 211.32□□□□□ -0.65e-17■□□□□ 11
RPS3P23396 RPL10-216ENST00000491035 1369 ntTSL 510.69□□□□□ -0.75e-17■□□□□ 11
RPS3P23396 RPL10-201ENST00000344746 2278 ntAPPRIS P1 TSL 1 (best)10.65□□□□□ -0.75e-17■□□□□ 11
RPS3P23396 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.655e-14■□□□□ 11
RPS3P23396 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.36■■□□□ 1.655e-14■□□□□ 11
RPS3P23396 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.36■■□□□ 1.655e-14■□□□□ 11
RPS3P23396 GNAS-237ENST00000480232 893 ntTSL 524.17■■□□□ 1.461e-13■□□□□ 11
RPS3P23396 GNAS-234ENST00000477931 1663 ntTSL 1 (best)23.16■■□□□ 1.35e-14■□□□□ 11
RPS3P23396 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.225e-14■□□□□ 11
RPS3P23396 GNAS-248ENST00000488652 953 ntTSL 520.65■□□□□ 0.91e-13■□□□□ 11
RPS3P23396 GNAS-238ENST00000480975 1534 ntTSL 519.48■□□□□ 0.715e-14■□□□□ 11
RPS3P23396 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.55□□□□□ -0.245e-14■□□□□ 11
RPS3P23396 GNAS-222ENST00000464624 3764 ntTSL 513.34□□□□□ -0.275e-14■□□□□ 11
RPS3P23396 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.45□□□□□ -0.425e-14■□□□□ 11
RPS3P23396 GNAS-245ENST00000487862 1782 ntTSL 211.68□□□□□ -0.545e-14■□□□□ 11
RPS3P23396 GNAS-232ENST00000476196 1839 ntTSL 211.19□□□□□ -0.625e-14■□□□□ 11
RPS3P23396 GNAS-247ENST00000488546 897 ntTSL 510.75□□□□□ -0.695e-14■□□□□ 11
RPS3P23396 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC10.36□□□□□ -0.755e-14■□□□□ 11
RPS3P23396 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC9.72□□□□□ -0.855e-14■□□□□ 11
RPS3P23396 GNAS-254ENST00000494081 557 ntTSL 58.76□□□□□ -1.015e-14■□□□□ 11
RPS3P23396 GNAS-255ENST00000496934 2837 ntTSL 26.74□□□□□ -1.335e-14■□□□□ 11
RPS3P23396 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.72□□□□□ -1.655e-14■□□□□ 11
RPS3P23396 SLC39A14-209ENST00000520644 377 ntTSL 519.26■□□□□ 0.672e-24■□□□□ 11
RPS3P23396 DHCR7-211ENST00000534701 456 ntTSL 311.18□□□□□ -0.625e-16■□□□□ 11
RPS3P23396 SQLE-203ENST00000518931 554 ntTSL 44.57□□□□□ -1.684e-13■□□□□ 11
RPS3P23396 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.27e-9■□□□□ 11
RPS3P23396 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.077e-9■□□□□ 11
RPS3P23396 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.937e-7■□□□□ 11
RPS3P23396 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.867e-7■□□□□ 11
RPS3P23396 OXSR1-202ENST00000426620 1581 ntTSL 1 (best)24.37■■□□□ 1.497e-7■□□□□ 11
RPS3P23396 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.27■■□□□ 1.487e-7■□□□□ 11
RPS3P23396 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.347e-7■□□□□ 11
RPS3P23396 AL355987.4-202ENST00000459985 1900 ntTSL 223.02■■□□□ 1.287e-7■□□□□ 11
RPS3P23396 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.46■■□□□ 1.197e-7■□□□□ 11
RPS3P23396 OXSR1-206ENST00000492714 471 ntTSL 320.52■□□□□ 0.887e-7■□□□□ 11
RPS3P23396 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.7■□□□□ 0.747e-7■□□□□ 11
RPS3P23396 RABL6-210ENST00000484471 2746 ntTSL 518.98■□□□□ 0.637e-7■□□□□ 11
RPS3P23396 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.337e-7■□□□□ 11
RPS3P23396 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.96■□□□□ 0.317e-7■□□□□ 11
RPS3P23396 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.227e-7■□□□□ 11
RPS3P23396 TRRAP-203ENST00000417523 550 ntTSL 415.53■□□□□ 0.087e-7■□□□□ 11
RPS3P23396 NECAP2-205ENST00000486390 572 ntTSL 214.31□□□□□ -0.127e-7■□□□□ 11
RPS3P23396 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.86□□□□□ -0.197e-7■□□□□ 11
RPS3P23396 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.62□□□□□ -0.237e-7■□□□□ 11
RPS3P23396 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.257e-7■□□□□ 11
RPS3P23396 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.78□□□□□ -0.367e-7■□□□□ 11
Retrieved 100 of 24,271 protein–RNA pairs in 298.6 ms