Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.49□□□□□ -0.09
NKX2-2O95096 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.49□□□□□ -0.09
NKX2-2O95096 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NKX2-2O95096 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 BASP1P1-201ENST00000430708 665 ntBASIC14.48□□□□□ -0.09
NKX2-2O95096 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 TIMM17BP1-201ENST00000545713 516 ntBASIC14.48□□□□□ -0.09
NKX2-2O95096 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX2-2O95096 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NKX2-2O95096 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX2-2O95096 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-2O95096 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 AL121723.1-201ENST00000445194 1519 ntBASIC14.47□□□□□ -0.09
NKX2-2O95096 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.47□□□□□ -0.09
NKX2-2O95096 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.47□□□□□ -0.09
NKX2-2O95096 AC005498.2-205ENST00000593218 784 ntBASIC14.47□□□□□ -0.09
NKX2-2O95096 AC008738.7-201ENST00000609744 511 ntBASIC14.47□□□□□ -0.09
NKX2-2O95096 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 AC004840.1-201ENST00000636359 365 ntBASIC14.47□□□□□ -0.09
NKX2-2O95096 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms