Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 MIR770-201ENST00000390219 98 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 KRT18P43-201ENST00000469825 1281 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 MEIS3P1-201ENST00000495167 958 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 AC000095.1-201ENST00000603208 874 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 DBET-201ENST00000630918 3363 ntBASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BLOC1S4Q9NUP1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 AC023024.2-201ENST00000623561 1993 ntBASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 CICP11-201ENST00000434745 2827 ntBASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
BLOC1S4Q9NUP1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BLOC1S4Q9NUP1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms