Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 SLED1-202ENST00000512051 380 ntBASIC16.14■□□□□ 0.17
SP110Q9HB58 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.14■□□□□ 0.17
SP110Q9HB58 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 AL355385.1-201ENST00000606123 409 ntBASIC16.14■□□□□ 0.17
SP110Q9HB58 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.14■□□□□ 0.17
SP110Q9HB58 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.14■□□□□ 0.17
SP110Q9HB58 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.14■□□□□ 0.17
SP110Q9HB58 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP110Q9HB58 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SP110Q9HB58 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.13■□□□□ 0.17
SP110Q9HB58 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.13■□□□□ 0.17
SP110Q9HB58 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 AC135586.1-201ENST00000539323 574 ntBASIC16.13■□□□□ 0.17
SP110Q9HB58 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.13■□□□□ 0.17
SP110Q9HB58 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
SP110Q9HB58 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.13■□□□□ 0.17
SP110Q9HB58 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SP110Q9HB58 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.13■□□□□ 0.17
SP110Q9HB58 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 BTBD7P1-201ENST00000447253 1453 ntBASIC16.13■□□□□ 0.17
SP110Q9HB58 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.13■□□□□ 0.17
SP110Q9HB58 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SP110Q9HB58 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP110Q9HB58 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.13■□□□□ 0.17
SP110Q9HB58 AC092850.2-201ENST00000623821 2697 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP110Q9HB58 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SP110Q9HB58 CICP6-201ENST00000457191 2729 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP110Q9HB58 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.12■□□□□ 0.17
SP110Q9HB58 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP110Q9HB58 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP110Q9HB58 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SP110Q9HB58 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.12■□□□□ 0.17
SP110Q9HB58 AC074338.1-201ENST00000416825 156 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
SP110Q9HB58 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.12■□□□□ 0.17
SP110Q9HB58 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.12■□□□□ 0.17
SP110Q9HB58 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.12■□□□□ 0.17
SP110Q9HB58 AC009407.1-201ENST00000568958 598 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SP110Q9HB58 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 LINC01115-203ENST00000606068 577 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 AC008738.7-201ENST00000609744 511 ntBASIC16.12■□□□□ 0.17
SP110Q9HB58 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.12■□□□□ 0.17
SP110Q9HB58 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.12■□□□□ 0.17
SP110Q9HB58 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SP110Q9HB58 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
SP110Q9HB58 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP110Q9HB58 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms