Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 AC018665.1-201ENST00000622927 1362 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 VDAC1P7-201ENST00000462417 847 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 PTP4A1P2-201ENST00000546033 454 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 AL022328.1-201ENST00000610050 478 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 AC133552.6-201ENST00000613406 534 ntBASIC17.03■□□□□ 0.32
PGBD4Q96DM1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.03■□□□□ 0.32
PGBD4Q96DM1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.32
PGBD4Q96DM1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.02■□□□□ 0.32
PGBD4Q96DM1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 AL133267.1-201ENST00000398220 340 ntBASIC17.02■□□□□ 0.32
PGBD4Q96DM1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 AC009486.1-201ENST00000569860 813 ntBASIC17.02■□□□□ 0.32
PGBD4Q96DM1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PGBD4Q96DM1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 AL596087.1-201ENST00000400979 1969 ntBASIC17.02■□□□□ 0.31
PGBD4Q96DM1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PGBD4Q96DM1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD4Q96DM1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.01■□□□□ 0.31
PGBD4Q96DM1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PGBD4Q96DM1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms