Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 GPS2P2-201ENST00000430745 888 ntBASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 RN7SL828P-201ENST00000607615 303 ntBASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AP001059.3-201ENST00000619053 235 ntBASIC13.83□□□□□ -0.2
SPTSSAQ969W0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 PPT1-215ENST00000641471 2368 ntBASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTSSAQ969W0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 SPDYE17-201ENST00000412399 783 ntBASIC13.82□□□□□ -0.2
SPTSSAQ969W0 AL645939.2-201ENST00000427340 991 ntBASIC13.82□□□□□ -0.2
SPTSSAQ969W0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 AP006288.1-201ENST00000446065 395 ntBASIC13.82□□□□□ -0.2
SPTSSAQ969W0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 AC079781.4-201ENST00000641908 219 ntBASIC13.82□□□□□ -0.2
SPTSSAQ969W0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 AC127383.1-201ENST00000444697 1800 ntBASIC13.82□□□□□ -0.2
SPTSSAQ969W0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
SPTSSAQ969W0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms