Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 SPDYE19P-201ENST00000338590 713 ntBASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AC004790.1-201ENST00000612686 536 ntBASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FNDC9Q8TBE3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AC007541.1-201ENST00000570282 1469 ntBASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 CRB3P1-201ENST00000449338 276 ntBASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AL132655.2-201ENST00000596276 594 ntBASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 SRD5A3P1-201ENST00000603021 949 ntBASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 AC018892.3-201ENST00000623986 2499 ntBASIC14.21□□□□□ -0.13
FNDC9Q8TBE3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 AP003680.1-201ENST00000598970 3660 ntBASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
FNDC9Q8TBE3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.2□□□□□ -0.14
FNDC9Q8TBE3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms