Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIPK4Q8NE63 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
HIPK4Q8NE63 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 AC012569.1-201ENST00000591191 1524 ntBASIC15.39■□□□□ 0.05
HIPK4Q8NE63 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 INTS4P1-203ENST00000641008 3683 ntBASIC15.39■□□□□ 0.05
HIPK4Q8NE63 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIPK4Q8NE63 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 HAUS4P1-201ENST00000406739 1145 ntBASIC15.38■□□□□ 0.05
HIPK4Q8NE63 AC026396.1-201ENST00000419388 421 ntBASIC15.38■□□□□ 0.05
HIPK4Q8NE63 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 AC008735.5-201ENST00000623544 497 ntBASIC15.38■□□□□ 0.05
HIPK4Q8NE63 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HIPK4Q8NE63 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms