Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 AP003392.6-201ENST00000607709 325 ntBASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 AP005019.2-201ENST00000615104 511 ntBASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC168Q8NDH2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 AL138799.1-201ENST00000448213 1675 ntBASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 AL353770.1-201ENST00000614915 403 ntBASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 AC074138.1-201ENST00000611182 1303 ntBASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC168Q8NDH2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC011742.3-201ENST00000439053 820 ntBASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC007881.3-201ENST00000608897 607 ntBASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 GAPDHP40-201ENST00000505218 1006 ntBASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 AC073413.1-201ENST00000603927 732 ntBASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC168Q8NDH2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 KLF2P2-201ENST00000416807 1039 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms