Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 CLUHP6-201ENST00000580789 941 ntBASIC17.51■□□□□ 0.39
TRIM50Q86XT4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.51■□□□□ 0.39
TRIM50Q86XT4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 HLA-V-201ENST00000429037 534 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 BCRP2-202ENST00000447763 634 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 KRT223P-202ENST00000449164 1292 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 BCRP6-201ENST00000510112 632 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 BCRP7-201ENST00000511549 544 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 AC005252.2-201ENST00000624630 1141 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 COX11-210ENST00000639671 696 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 AL513477.1-201ENST00000602865 2407 ntBASIC17.5■□□□□ 0.39
TRIM50Q86XT4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM50Q86XT4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 RPL13AP25-201ENST00000484130 612 ntBASIC17.49■□□□□ 0.39
TRIM50Q86XT4 LINC02447-202ENST00000501888 2146 ntBASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AC068587.3-201ENST00000526613 355 ntBASIC17.49■□□□□ 0.39
TRIM50Q86XT4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AC079416.2-201ENST00000625035 1193 ntBASIC17.49■□□□□ 0.39
TRIM50Q86XT4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.49■□□□□ 0.39
TRIM50Q86XT4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms