Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HIST1H2BCP62807 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 FAM90A12P-201ENST00000519497 2375 ntBASIC11.84□□□□□ -0.51
HIST1H2BCP62807 FAM90A24P-201ENST00000520792 2369 ntBASIC11.84□□□□□ -0.51
HIST1H2BCP62807 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 AC011700.1-201ENST00000610409 2627 ntBASIC11.84□□□□□ -0.51
HIST1H2BCP62807 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 NUDT16P1-203ENST00000513809 620 ntBASIC11.84□□□□□ -0.51
HIST1H2BCP62807 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 AL353719.1-201ENST00000566847 864 ntBASIC11.84□□□□□ -0.51
HIST1H2BCP62807 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 AL590326.2-201ENST00000625139 305 ntBASIC11.84□□□□□ -0.51
HIST1H2BCP62807 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H2BCP62807 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.83□□□□□ -0.51
HIST1H2BCP62807 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.83□□□□□ -0.51
HIST1H2BCP62807 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
HIST1H2BCP62807 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
HIST1H2BCP62807 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 GXYLT1P2-201ENST00000433312 1230 ntBASIC11.83□□□□□ -0.52
HIST1H2BCP62807 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H2BCP62807 AP003733.1-201ENST00000491725 852 ntBASIC11.83□□□□□ -0.52
HIST1H2BCP62807 OAS3-207ENST00000551007 998 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms