Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.27□□□□□ -0.6
UBE2D3P61077 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.27□□□□□ -0.6
UBE2D3P61077 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
UBE2D3P61077 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
UBE2D3P61077 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.27□□□□□ -0.6
UBE2D3P61077 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
UBE2D3P61077 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2D3P61077 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.27□□□□□ -0.6
UBE2D3P61077 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.27□□□□□ -0.6
UBE2D3P61077 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2D3P61077 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.27□□□□□ -0.6
UBE2D3P61077 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.27□□□□□ -0.6
UBE2D3P61077 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D3P61077 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D3P61077 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D3P61077 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2D3P61077 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2D3P61077 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2D3P61077 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AL138918.1-201ENST00000568306 659 ntBASIC11.27□□□□□ -0.61
UBE2D3P61077 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AC061975.2-201ENST00000581722 295 ntBASIC11.27□□□□□ -0.61
UBE2D3P61077 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D3P61077 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
UBE2D3P61077 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 AC087481.3-201ENST00000602886 1894 ntBASIC11.27□□□□□ -0.61
UBE2D3P61077 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2D3P61077 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
UBE2D3P61077 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2D3P61077 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
UBE2D3P61077 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
UBE2D3P61077 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms