Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.64■□□□□ 0.25
SNX16P57768 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNX16P57768 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SNX16P57768 OR2I1P-209ENST00000641730 5365 ntBASIC16.64■□□□□ 0.25
SNX16P57768 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX16P57768 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNX16P57768 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 AL161772.1-201ENST00000610494 4412 ntBASIC16.63■□□□□ 0.25
SNX16P57768 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.63■□□□□ 0.25
SNX16P57768 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.63■□□□□ 0.25
SNX16P57768 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.63■□□□□ 0.25
SNX16P57768 SLED1-202ENST00000512051 380 ntBASIC16.63■□□□□ 0.25
SNX16P57768 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 AL512361.1-201ENST00000554200 418 ntBASIC16.63■□□□□ 0.25
SNX16P57768 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SNX16P57768 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNX16P57768 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 AC087481.3-201ENST00000602886 1894 ntBASIC16.63■□□□□ 0.25
SNX16P57768 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX16P57768 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SNX16P57768 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX16P57768 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX16P57768 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.62■□□□□ 0.25
SNX16P57768 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX16P57768 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX16P57768 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.62■□□□□ 0.25
SNX16P57768 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 AL390754.1-201ENST00000619088 582 ntBASIC16.62■□□□□ 0.25
SNX16P57768 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SNX16P57768 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX16P57768 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNX16P57768 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX16P57768 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms