Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV3P03979 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV3P03979 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRGV3P03979 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
TRGV3P03979 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 AZGP1P1-201ENST00000411909 902 ntBASIC12.44□□□□□ -0.42
TRGV3P03979 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.44□□□□□ -0.42
TRGV3P03979 AC055876.3-201ENST00000431496 288 ntBASIC12.44□□□□□ -0.42
TRGV3P03979 AC241585.1-201ENST00000433527 519 ntBASIC12.44□□□□□ -0.42
TRGV3P03979 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.44□□□□□ -0.42
TRGV3P03979 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 AC093214.1-201ENST00000511688 1107 ntBASIC12.44□□□□□ -0.42
TRGV3P03979 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.44□□□□□ -0.42
TRGV3P03979 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.44□□□□□ -0.42
TRGV3P03979 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.44□□□□□ -0.42
TRGV3P03979 AC138649.4-201ENST00000612222 287 ntBASIC12.44□□□□□ -0.42
TRGV3P03979 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
TRGV3P03979 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.44□□□□□ -0.42
TRGV3P03979 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.44□□□□□ -0.42
TRGV3P03979 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
TRGV3P03979 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TRGV3P03979 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV3P03979 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV3P03979 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRGV3P03979 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 AC018892.3-201ENST00000623986 2499 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms