Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC139713.2-201ENST00000641328 2723 ntBASIC15.61■□□□□ 0.09
PDGFBP01127 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
PDGFBP01127 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PDGFBP01127 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PDGFBP01127 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 AC026316.1-201ENST00000398900 414 ntBASIC15.61■□□□□ 0.09
PDGFBP01127 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PDGFBP01127 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.61■□□□□ 0.09
PDGFBP01127 PDIA3P2-201ENST00000428073 158 ntBASIC15.61■□□□□ 0.09
PDGFBP01127 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PDGFBP01127 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.61■□□□□ 0.09
PDGFBP01127 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 AC132192.2-201ENST00000596206 1147 ntBASIC15.61■□□□□ 0.09
PDGFBP01127 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFBP01127 ZACNP1-201ENST00000612259 710 ntBASIC15.61■□□□□ 0.09
PDGFBP01127 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDGFBP01127 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.61■□□□□ 0.09
PDGFBP01127 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 AC005915.1-201ENST00000624912 2018 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 AC007613.1-201ENST00000572811 2597 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PDGFBP01127 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.6■□□□□ 0.09
PDGFBP01127 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFBP01127 CHMP1AP1-201ENST00000445563 662 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.6■□□□□ 0.09
PDGFBP01127 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFBP01127 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.6■□□□□ 0.09
PDGFBP01127 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.6■□□□□ 0.09
PDGFBP01127 BNIP3P13-201ENST00000599968 566 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 AL023803.2-201ENST00000620080 638 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 AC006453.1-201ENST00000636037 1257 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 AC004923.1-202ENST00000642106 209 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 RNF216P1-203ENST00000404404 2427 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.6■□□□□ 0.09
PDGFBP01127 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.6■□□□□ 0.09
PDGFBP01127 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 AL157791.1-201ENST00000553667 1699 ntBASIC15.6■□□□□ 0.09
PDGFBP01127 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PDGFBP01127 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.6■□□□□ 0.09
PDGFBP01127 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDGFBP01127 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PDGFBP01127 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFBP01127 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PDGFBP01127 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms