Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 COX11-210ENST00000639671 696 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TBC1D3FA6NER0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
TBC1D3FA6NER0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 HLA-V-201ENST00000429037 534 ntBASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 SNX29P1-201ENST00000548357 1007 ntBASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TBC1D3FA6NER0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 PCDHB19P-201ENST00000570871 2371 ntBASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AC068587.3-201ENST00000526613 355 ntBASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AC009486.1-201ENST00000569860 813 ntBASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 AC000095.1-201ENST00000603208 874 ntBASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TBC1D3FA6NER0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms