Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA11Q9Y5H2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDHGA11Q9Y5H2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGA11Q9Y5H2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA11Q9Y5H2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGA11Q9Y5H2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGA11Q9Y5H2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGA11Q9Y5H2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHGA11Q9Y5H2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA11Q9Y5H2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA11Q9Y5H2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA11Q9Y5H2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA11Q9Y5H2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 LINC01124-201ENST00000409786 2117 ntBASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA11Q9Y5H2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA11Q9Y5H2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGA11Q9Y5H2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA11Q9Y5H2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA11Q9Y5H2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA11Q9Y5H2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA11Q9Y5H2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 AL592295.1-201ENST00000400984 884 ntBASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 LONRF2P2-201ENST00000439212 571 ntBASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 AC133561.1-201ENST00000568600 2415 ntBASIC22.51■■□□□ 1.19
PCDHGA11Q9Y5H2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 LINC00543-201ENST00000567234 1845 ntBASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA11Q9Y5H2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 AC141586.4-201ENST00000624558 1573 ntBASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA11Q9Y5H2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGA11Q9Y5H2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHGA11Q9Y5H2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA11Q9Y5H2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA11Q9Y5H2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA11Q9Y5H2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.47■■□□□ 1.19
PCDHGA11Q9Y5H2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGA11Q9Y5H2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA11Q9Y5H2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGA11Q9Y5H2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA11Q9Y5H2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA11Q9Y5H2 DUX4L18-201ENST00000553347 1267 ntBASIC22.46■■□□□ 1.19
PCDHGA11Q9Y5H2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms