Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC4Q9Y5F7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 MIR6089-201ENST00000616698 64 ntBASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGC4Q9Y5F7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC4Q9Y5F7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDHGC4Q9Y5F7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC4Q9Y5F7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC4Q9Y5F7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGC4Q9Y5F7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC4Q9Y5F7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGC4Q9Y5F7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHGC4Q9Y5F7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHGC4Q9Y5F7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGC4Q9Y5F7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGC4Q9Y5F7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGC4Q9Y5F7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
PCDHGC4Q9Y5F7 MIR4281-201ENST00000580852 62 ntBASIC23.58■■□□□ 1.37
PCDHGC4Q9Y5F7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGC4Q9Y5F7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHGC4Q9Y5F7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDHGC4Q9Y5F7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDHGC4Q9Y5F7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC4Q9Y5F7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHGC4Q9Y5F7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.57■■□□□ 1.36
PCDHGC4Q9Y5F7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC4Q9Y5F7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHGC4Q9Y5F7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC4Q9Y5F7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 AC009299.2-201ENST00000482477 511 ntBASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC4Q9Y5F7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC4Q9Y5F7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDHGC4Q9Y5F7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGC4Q9Y5F7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC4Q9Y5F7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC4Q9Y5F7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 AP003733.4-201ENST00000623785 1697 ntBASIC23.54■■□□□ 1.36
PCDHGC4Q9Y5F7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGC4Q9Y5F7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC4Q9Y5F7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC4Q9Y5F7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGC4Q9Y5F7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
PCDHGC4Q9Y5F7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGC4Q9Y5F7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC4Q9Y5F7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 AL035685.1-201ENST00000636663 812 ntBASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGC4Q9Y5F7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDHGC4Q9Y5F7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms