Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 UNC93B3-201ENST00000308076 687 ntBASIC36.47■■■■□ 3.43
CDK11AQ9UQ88 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
CDK11AQ9UQ88 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC36.47■■■■□ 3.43
CDK11AQ9UQ88 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC36.47■■■■□ 3.43
CDK11AQ9UQ88 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC36.47■■■■□ 3.43
CDK11AQ9UQ88 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC36.47■■■■□ 3.43
CDK11AQ9UQ88 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CDK11AQ9UQ88 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC36.46■■■■□ 3.43
CDK11AQ9UQ88 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC36.46■■■■□ 3.43
CDK11AQ9UQ88 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 AC142381.2-201ENST00000566120 298 ntBASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC36.45■■■■□ 3.43
CDK11AQ9UQ88 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC36.45■■■■□ 3.42
CDK11AQ9UQ88 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC36.44■■■■□ 3.42
CDK11AQ9UQ88 GUK1-205ENST00000366722 850 ntTSL 3 BASIC36.44■■■■□ 3.42
CDK11AQ9UQ88 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
CDK11AQ9UQ88 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CDK11AQ9UQ88 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC36.43■■■■□ 3.42
CDK11AQ9UQ88 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC36.43■■■■□ 3.42
CDK11AQ9UQ88 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC36.43■■■■□ 3.42
CDK11AQ9UQ88 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC36.43■■■■□ 3.42
CDK11AQ9UQ88 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
CDK11AQ9UQ88 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC36.43■■■■□ 3.42
CDK11AQ9UQ88 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC36.42■■■■□ 3.42
CDK11AQ9UQ88 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC36.42■■■■□ 3.42
CDK11AQ9UQ88 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC36.42■■■■□ 3.42
CDK11AQ9UQ88 SRD5A1P1-201ENST00000442297 786 ntBASIC36.42■■■■□ 3.42
CDK11AQ9UQ88 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CDK11AQ9UQ88 ZNRF2P3-201ENST00000424200 374 ntBASIC36.41■■■■□ 3.42
CDK11AQ9UQ88 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.41■■■■□ 3.42
CDK11AQ9UQ88 AL031432.3-201ENST00000607698 485 ntBASIC36.41■■■■□ 3.42
CDK11AQ9UQ88 AL136162.1-201ENST00000607711 1078 ntBASIC36.41■■■■□ 3.42
CDK11AQ9UQ88 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
CDK11AQ9UQ88 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC36.4■■■■□ 3.42
CDK11AQ9UQ88 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
CDK11AQ9UQ88 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC36.4■■■■□ 3.42
CDK11AQ9UQ88 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
CDK11AQ9UQ88 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 AC004448.1-201ENST00000458332 883 ntBASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 SUDS3P1-201ENST00000505831 966 ntBASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC36.39■■■■□ 3.42
CDK11AQ9UQ88 AC135279.3-201ENST00000610945 1311 ntBASIC36.38■■■■□ 3.41
CDK11AQ9UQ88 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC36.38■■■■□ 3.41
CDK11AQ9UQ88 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC36.38■■■■□ 3.41
CDK11AQ9UQ88 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC36.38■■■■□ 3.41
CDK11AQ9UQ88 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CDK11AQ9UQ88 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CDK11AQ9UQ88 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 ERN1-208ENST00000606895 2068 ntBASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC36.37■■■■□ 3.41
CDK11AQ9UQ88 SHF-206ENST00000560471 2499 ntTSL 5 BASIC36.36■■■■□ 3.41
CDK11AQ9UQ88 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC36.36■■■■□ 3.41
CDK11AQ9UQ88 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC36.36■■■■□ 3.41
CDK11AQ9UQ88 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC36.36■■■■□ 3.41
CDK11AQ9UQ88 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC36.36■■■■□ 3.41
CDK11AQ9UQ88 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC36.36■■■■□ 3.41
CDK11AQ9UQ88 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
CDK11AQ9UQ88 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
CDK11AQ9UQ88 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
CDK11AQ9UQ88 EDA-201ENST00000338901 1233 ntBASIC36.35■■■■□ 3.41
CDK11AQ9UQ88 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC36.35■■■■□ 3.41
CDK11AQ9UQ88 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
CDK11AQ9UQ88 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 GATM-206ENST00000558336 1522 ntTSL 2 BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDK11AQ9UQ88 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CDK11AQ9UQ88 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC36.32■■■■□ 3.4
CDK11AQ9UQ88 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC36.32■■■■□ 3.4
CDK11AQ9UQ88 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CDK11AQ9UQ88 RARRES2P6-201ENST00000567333 442 ntBASIC36.31■■■■□ 3.4
CDK11AQ9UQ88 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC36.31■■■■□ 3.4
CDK11AQ9UQ88 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC36.31■■■■□ 3.4
CDK11AQ9UQ88 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms