Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.39■■□□□ 1.82
HDAC6Q9UBN7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.39■■□□□ 1.82
HDAC6Q9UBN7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
HDAC6Q9UBN7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.38■■□□□ 1.81
HDAC6Q9UBN7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HDAC6Q9UBN7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.37■■□□□ 1.81
HDAC6Q9UBN7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
HDAC6Q9UBN7 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.37■■□□□ 1.81
HDAC6Q9UBN7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HDAC6Q9UBN7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.36■■□□□ 1.81
HDAC6Q9UBN7 AC011551.1-201ENST00000614101 683 ntBASIC26.36■■□□□ 1.81
HDAC6Q9UBN7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HDAC6Q9UBN7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HDAC6Q9UBN7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HDAC6Q9UBN7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
HDAC6Q9UBN7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.35■■□□□ 1.81
HDAC6Q9UBN7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.35■■□□□ 1.81
HDAC6Q9UBN7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
HDAC6Q9UBN7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
HDAC6Q9UBN7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
HDAC6Q9UBN7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HDAC6Q9UBN7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HDAC6Q9UBN7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.33■■□□□ 1.81
HDAC6Q9UBN7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.33■■□□□ 1.81
HDAC6Q9UBN7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
HDAC6Q9UBN7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
HDAC6Q9UBN7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.33■■□□□ 1.8
HDAC6Q9UBN7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
HDAC6Q9UBN7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 AC010997.5-201ENST00000609182 354 ntBASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
HDAC6Q9UBN7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 AC131281.2-201ENST00000520478 145 ntBASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HDAC6Q9UBN7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.3■■□□□ 1.8
HDAC6Q9UBN7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HDAC6Q9UBN7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.3■■□□□ 1.8
HDAC6Q9UBN7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
HDAC6Q9UBN7 AC093323.1-202ENST00000635031 2045 ntBASIC26.3■■□□□ 1.8
HDAC6Q9UBN7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HDAC6Q9UBN7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.29■■□□□ 1.8
HDAC6Q9UBN7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 AL117332.1-201ENST00000622628 974 ntBASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.28■■□□□ 1.8
HDAC6Q9UBN7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 MTDHP2-201ENST00000601468 714 ntBASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HDAC6Q9UBN7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.26■■□□□ 1.79
HDAC6Q9UBN7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
HDAC6Q9UBN7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms