Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNIH4Q9P003 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.74■■□□□ 1.07
CNIH4Q9P003 AC103724.3-201ENST00000564481 992 ntBASIC21.74■■□□□ 1.07
CNIH4Q9P003 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.74■■□□□ 1.07
CNIH4Q9P003 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNIH4Q9P003 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CNIH4Q9P003 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.73■■□□□ 1.07
CNIH4Q9P003 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.73■■□□□ 1.07
CNIH4Q9P003 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNIH4Q9P003 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNIH4Q9P003 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNIH4Q9P003 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNIH4Q9P003 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CNIH4Q9P003 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.73■■□□□ 1.07
CNIH4Q9P003 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CNIH4Q9P003 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNIH4Q9P003 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNIH4Q9P003 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.72■■□□□ 1.07
CNIH4Q9P003 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CNIH4Q9P003 AL031848.2-201ENST00000607670 837 ntBASIC21.72■■□□□ 1.07
CNIH4Q9P003 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CNIH4Q9P003 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNIH4Q9P003 SLC6A10P-202ENST00000431994 2058 ntBASIC21.71■■□□□ 1.07
CNIH4Q9P003 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.71■■□□□ 1.07
CNIH4Q9P003 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNIH4Q9P003 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
CNIH4Q9P003 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNIH4Q9P003 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNIH4Q9P003 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.71■■□□□ 1.07
CNIH4Q9P003 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CNIH4Q9P003 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNIH4Q9P003 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CNIH4Q9P003 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNIH4Q9P003 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNIH4Q9P003 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CNIH4Q9P003 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNIH4Q9P003 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CNIH4Q9P003 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNIH4Q9P003 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNIH4Q9P003 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNIH4Q9P003 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNIH4Q9P003 KRT18P24-201ENST00000344739 1156 ntBASIC21.69■■□□□ 1.06
CNIH4Q9P003 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.69■■□□□ 1.06
CNIH4Q9P003 AL451085.2-201ENST00000605085 799 ntBASIC21.69■■□□□ 1.06
CNIH4Q9P003 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNIH4Q9P003 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
CNIH4Q9P003 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.69■■□□□ 1.06
CNIH4Q9P003 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNIH4Q9P003 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNIH4Q9P003 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNIH4Q9P003 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNIH4Q9P003 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CNIH4Q9P003 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNIH4Q9P003 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CNIH4Q9P003 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.68■■□□□ 1.06
CNIH4Q9P003 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNIH4Q9P003 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNIH4Q9P003 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNIH4Q9P003 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNIH4Q9P003 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.67■■□□□ 1.06
CNIH4Q9P003 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNIH4Q9P003 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNIH4Q9P003 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.67■■□□□ 1.06
CNIH4Q9P003 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.67■■□□□ 1.06
CNIH4Q9P003 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNIH4Q9P003 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNIH4Q9P003 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNIH4Q9P003 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.66■■□□□ 1.06
CNIH4Q9P003 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNIH4Q9P003 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNIH4Q9P003 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNIH4Q9P003 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNIH4Q9P003 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.66■■□□□ 1.06
CNIH4Q9P003 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNIH4Q9P003 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNIH4Q9P003 LINC01124-201ENST00000409786 2117 ntBASIC21.65■■□□□ 1.06
CNIH4Q9P003 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNIH4Q9P003 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNIH4Q9P003 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.65■■□□□ 1.06
CNIH4Q9P003 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNIH4Q9P003 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CNIH4Q9P003 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.65■■□□□ 1.06
CNIH4Q9P003 FOXO3B-201ENST00000395675 1928 ntBASIC21.65■■□□□ 1.06
CNIH4Q9P003 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNIH4Q9P003 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CNIH4Q9P003 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNIH4Q9P003 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CNIH4Q9P003 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNIH4Q9P003 AP003733.4-201ENST00000623785 1697 ntBASIC21.64■■□□□ 1.05
CNIH4Q9P003 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNIH4Q9P003 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CNIH4Q9P003 THA1P-201ENST00000590384 1145 ntBASIC21.64■■□□□ 1.05
CNIH4Q9P003 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNIH4Q9P003 AL035685.1-201ENST00000636663 812 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms