Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C12orf4Q9NQ89 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C12orf4Q9NQ89 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
C12orf4Q9NQ89 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C12orf4Q9NQ89 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 PKD1P6-201ENST00000343738 4769 ntBASIC20.03■□□□□ 0.8
C12orf4Q9NQ89 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C12orf4Q9NQ89 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.02■□□□□ 0.8
C12orf4Q9NQ89 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C12orf4Q9NQ89 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.02■□□□□ 0.8
C12orf4Q9NQ89 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
C12orf4Q9NQ89 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C12orf4Q9NQ89 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
C12orf4Q9NQ89 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
C12orf4Q9NQ89 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C12orf4Q9NQ89 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20■□□□□ 0.79
C12orf4Q9NQ89 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20■□□□□ 0.79
C12orf4Q9NQ89 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20■□□□□ 0.79
C12orf4Q9NQ89 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 MIR3648-2-201ENST00000581792 180 ntBASIC20■□□□□ 0.79
C12orf4Q9NQ89 MIR3648-1-201ENST00000615959 180 ntBASIC20■□□□□ 0.79
C12orf4Q9NQ89 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
C12orf4Q9NQ89 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
C12orf4Q9NQ89 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 SLC6A10P-202ENST00000431994 2058 ntBASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.99■□□□□ 0.79
C12orf4Q9NQ89 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C12orf4Q9NQ89 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C12orf4Q9NQ89 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
C12orf4Q9NQ89 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
C12orf4Q9NQ89 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
C12orf4Q9NQ89 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C12orf4Q9NQ89 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 LINC01124-201ENST00000409786 2117 ntBASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C12orf4Q9NQ89 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 ABHD17AP4-201ENST00000411545 909 ntBASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.96■□□□□ 0.79
C12orf4Q9NQ89 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.95■□□□□ 0.78
C12orf4Q9NQ89 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
C12orf4Q9NQ89 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.95■□□□□ 0.78
C12orf4Q9NQ89 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C12orf4Q9NQ89 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms