Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GCM1Q9NP62 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GCM1Q9NP62 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 AC011551.1-201ENST00000614101 683 ntBASIC19.84■□□□□ 0.77
GCM1Q9NP62 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCM1Q9NP62 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GCM1Q9NP62 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCM1Q9NP62 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCM1Q9NP62 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.83■□□□□ 0.77
GCM1Q9NP62 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GCM1Q9NP62 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GCM1Q9NP62 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.83■□□□□ 0.76
GCM1Q9NP62 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GCM1Q9NP62 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCM1Q9NP62 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCM1Q9NP62 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GCM1Q9NP62 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCM1Q9NP62 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCM1Q9NP62 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCM1Q9NP62 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCM1Q9NP62 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 AC020928.2-201ENST00000588717 2197 ntBASIC19.82■□□□□ 0.76
GCM1Q9NP62 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.82■□□□□ 0.76
GCM1Q9NP62 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCM1Q9NP62 AC090877.2-201ENST00000558441 1738 ntBASIC19.82■□□□□ 0.76
GCM1Q9NP62 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCM1Q9NP62 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCM1Q9NP62 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCM1Q9NP62 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 AL451085.2-201ENST00000605085 799 ntBASIC19.81■□□□□ 0.76
GCM1Q9NP62 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCM1Q9NP62 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCM1Q9NP62 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
GCM1Q9NP62 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCM1Q9NP62 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCM1Q9NP62 AC022211.4-201ENST00000625094 2161 ntBASIC19.8■□□□□ 0.76
GCM1Q9NP62 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GCM1Q9NP62 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCM1Q9NP62 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCM1Q9NP62 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.8■□□□□ 0.76
GCM1Q9NP62 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCM1Q9NP62 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
GCM1Q9NP62 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.79■□□□□ 0.76
GCM1Q9NP62 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCM1Q9NP62 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.79■□□□□ 0.76
GCM1Q9NP62 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.79■□□□□ 0.76
GCM1Q9NP62 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.79■□□□□ 0.76
GCM1Q9NP62 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCM1Q9NP62 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.79■□□□□ 0.76
GCM1Q9NP62 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCM1Q9NP62 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCM1Q9NP62 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCM1Q9NP62 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GCM1Q9NP62 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCM1Q9NP62 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.78■□□□□ 0.76
GCM1Q9NP62 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GCM1Q9NP62 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCM1Q9NP62 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
GCM1Q9NP62 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCM1Q9NP62 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCM1Q9NP62 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCM1Q9NP62 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.77■□□□□ 0.76
GCM1Q9NP62 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
GCM1Q9NP62 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
GCM1Q9NP62 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GCM1Q9NP62 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.77■□□□□ 0.76
GCM1Q9NP62 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GCM1Q9NP62 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GCM1Q9NP62 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GCM1Q9NP62 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GCM1Q9NP62 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GCM1Q9NP62 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.76■□□□□ 0.75
GCM1Q9NP62 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.76■□□□□ 0.75
GCM1Q9NP62 AC009299.2-201ENST00000482477 511 ntBASIC19.76■□□□□ 0.75
GCM1Q9NP62 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GCM1Q9NP62 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GCM1Q9NP62 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GCM1Q9NP62 MIR6089-201ENST00000616698 64 ntBASIC19.76■□□□□ 0.75
GCM1Q9NP62 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GCM1Q9NP62 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GCM1Q9NP62 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GCM1Q9NP62 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms