Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.23■■□□□ 1.63
RC3H2Q9HBD1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 AC096887.2-201ENST00000623443 1957 ntBASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 AC026271.2-201ENST00000428091 497 ntBASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.22■■□□□ 1.63
RC3H2Q9HBD1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 AL136162.1-201ENST00000607711 1078 ntBASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RC3H2Q9HBD1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H2Q9HBD1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RC3H2Q9HBD1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.2■■□□□ 1.62
RC3H2Q9HBD1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 AC135279.3-201ENST00000610945 1311 ntBASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RC3H2Q9HBD1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
RC3H2Q9HBD1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.17■■□□□ 1.62
RC3H2Q9HBD1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RC3H2Q9HBD1 AC024257.2-201ENST00000549699 147 ntBASIC25.17■■□□□ 1.62
RC3H2Q9HBD1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 EDA-201ENST00000338901 1233 ntBASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 SRD5A1P1-201ENST00000442297 786 ntBASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.16■■□□□ 1.62
RC3H2Q9HBD1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 AC097639.1-201ENST00000565519 1891 ntBASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H2Q9HBD1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H2Q9HBD1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.14■■□□□ 1.61
RC3H2Q9HBD1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 AC004448.1-201ENST00000458332 883 ntBASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 AL355001.2-201ENST00000620617 1191 ntBASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
RC3H2Q9HBD1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 ERN1-208ENST00000606895 2068 ntBASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H2Q9HBD1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms