Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX47Q9H0S4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX47Q9H0S4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.28■■□□□ 1.48
DDX47Q9H0S4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX47Q9H0S4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX47Q9H0S4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX47Q9H0S4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX47Q9H0S4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX47Q9H0S4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX47Q9H0S4 AC092296.2-201ENST00000589470 999 ntBASIC24.26■■□□□ 1.47
DDX47Q9H0S4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
DDX47Q9H0S4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
DDX47Q9H0S4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
DDX47Q9H0S4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX47Q9H0S4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX47Q9H0S4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX47Q9H0S4 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.24■■□□□ 1.47
DDX47Q9H0S4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX47Q9H0S4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX47Q9H0S4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX47Q9H0S4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX47Q9H0S4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX47Q9H0S4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX47Q9H0S4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX47Q9H0S4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX47Q9H0S4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
DDX47Q9H0S4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX47Q9H0S4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DDX47Q9H0S4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX47Q9H0S4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
DDX47Q9H0S4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX47Q9H0S4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
DDX47Q9H0S4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 RP9P-202ENST00000450133 1212 ntBASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX47Q9H0S4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.19■■□□□ 1.46
DDX47Q9H0S4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.19■■□□□ 1.46
DDX47Q9H0S4 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX47Q9H0S4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX47Q9H0S4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX47Q9H0S4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX47Q9H0S4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 AC093536.1-201ENST00000569153 554 ntBASIC24.18■■□□□ 1.46
DDX47Q9H0S4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms