Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GFI1Q99684 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GFI1Q99684 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GFI1Q99684 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.22■□□□□ 0.83
GFI1Q99684 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFI1Q99684 ZNRF2P2-203ENST00000454624 420 ntBASIC20.22■□□□□ 0.83
GFI1Q99684 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GFI1Q99684 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFI1Q99684 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GFI1Q99684 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GFI1Q99684 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFI1Q99684 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GFI1Q99684 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFI1Q99684 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GFI1Q99684 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GFI1Q99684 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFI1Q99684 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.21■□□□□ 0.83
GFI1Q99684 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GFI1Q99684 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.21■□□□□ 0.83
GFI1Q99684 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFI1Q99684 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GFI1Q99684 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GFI1Q99684 CLDN5-201ENST00000403084 2357 ntBASIC20.2■□□□□ 0.82
GFI1Q99684 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.2■□□□□ 0.82
GFI1Q99684 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GFI1Q99684 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFI1Q99684 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFI1Q99684 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFI1Q99684 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.2■□□□□ 0.82
GFI1Q99684 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GFI1Q99684 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.19■□□□□ 0.82
GFI1Q99684 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.19■□□□□ 0.82
GFI1Q99684 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.19■□□□□ 0.82
GFI1Q99684 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.19■□□□□ 0.82
GFI1Q99684 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.19■□□□□ 0.82
GFI1Q99684 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GFI1Q99684 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GFI1Q99684 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.18■□□□□ 0.82
GFI1Q99684 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GFI1Q99684 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GFI1Q99684 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GFI1Q99684 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GFI1Q99684 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GFI1Q99684 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GFI1Q99684 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.17■□□□□ 0.82
GFI1Q99684 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.17■□□□□ 0.82
GFI1Q99684 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.17■□□□□ 0.82
GFI1Q99684 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GFI1Q99684 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GFI1Q99684 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.17■□□□□ 0.82
GFI1Q99684 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GFI1Q99684 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GFI1Q99684 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.16■□□□□ 0.82
GFI1Q99684 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GFI1Q99684 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GFI1Q99684 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GFI1Q99684 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GFI1Q99684 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GFI1Q99684 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.15■□□□□ 0.82
GFI1Q99684 MIR3960-201ENST00000583311 91 ntBASIC20.15■□□□□ 0.82
GFI1Q99684 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
GFI1Q99684 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GFI1Q99684 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
GFI1Q99684 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GFI1Q99684 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GFI1Q99684 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GFI1Q99684 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GFI1Q99684 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.14■□□□□ 0.81
GFI1Q99684 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
GFI1Q99684 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFI1Q99684 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFI1Q99684 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFI1Q99684 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.13■□□□□ 0.81
GFI1Q99684 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.13■□□□□ 0.81
GFI1Q99684 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.13■□□□□ 0.81
GFI1Q99684 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.13■□□□□ 0.81
GFI1Q99684 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFI1Q99684 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GFI1Q99684 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GFI1Q99684 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.13■□□□□ 0.81
GFI1Q99684 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.13■□□□□ 0.81
GFI1Q99684 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms