Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 LONRF2P2-201ENST00000439212 571 ntBASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC27.4■■□□□ 1.98
SMARCC2Q8TAQ2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
SMARCC2Q8TAQ2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
SMARCC2Q8TAQ2 AC019171.1-201ENST00000601251 1056 ntBASIC27.39■■□□□ 1.98
SMARCC2Q8TAQ2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.39■■□□□ 1.97
SMARCC2Q8TAQ2 LINC00543-201ENST00000567234 1845 ntBASIC27.39■■□□□ 1.97
SMARCC2Q8TAQ2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCC2Q8TAQ2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCC2Q8TAQ2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.38■■□□□ 1.97
SMARCC2Q8TAQ2 YBX1P4-201ENST00000392794 808 ntBASIC27.38■■□□□ 1.97
SMARCC2Q8TAQ2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.38■■□□□ 1.97
SMARCC2Q8TAQ2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMARCC2Q8TAQ2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
SMARCC2Q8TAQ2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.37■■□□□ 1.97
SMARCC2Q8TAQ2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.37■■□□□ 1.97
SMARCC2Q8TAQ2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC2Q8TAQ2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC2Q8TAQ2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMARCC2Q8TAQ2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 AC103834.1-201ENST00000520383 144 ntBASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCC2Q8TAQ2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCC2Q8TAQ2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC2Q8TAQ2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.34■■□□□ 1.97
SMARCC2Q8TAQ2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
SMARCC2Q8TAQ2 MIR4508-201ENST00000584178 70 ntBASIC27.34■■□□□ 1.97
SMARCC2Q8TAQ2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.34■■□□□ 1.97
SMARCC2Q8TAQ2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCC2Q8TAQ2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCC2Q8TAQ2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.32■■□□□ 1.96
SMARCC2Q8TAQ2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 AC141586.4-201ENST00000624558 1573 ntBASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMARCC2Q8TAQ2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SMARCC2Q8TAQ2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCC2Q8TAQ2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCC2Q8TAQ2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCC2Q8TAQ2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC2Q8TAQ2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCC2Q8TAQ2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCC2Q8TAQ2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SMARCC2Q8TAQ2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.28■■□□□ 1.96
SMARCC2Q8TAQ2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCC2Q8TAQ2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SMARCC2Q8TAQ2 HLA-L-211ENST00000482052 1765 ntBASIC27.27■■□□□ 1.96
SMARCC2Q8TAQ2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms