Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF563Q8TA94 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF563Q8TA94 AL139125.2-201ENST00000623134 1869 ntBASIC21.35■■□□□ 1.01
ZNF563Q8TA94 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 AC074183.2-201ENST00000623112 922 ntBASIC21.34■■□□□ 1.01
ZNF563Q8TA94 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ZNF563Q8TA94 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
ZNF563Q8TA94 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.33■■□□□ 1
ZNF563Q8TA94 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.33■■□□□ 1
ZNF563Q8TA94 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZNF563Q8TA94 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.32■■□□□ 1
ZNF563Q8TA94 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF563Q8TA94 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF563Q8TA94 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.32■■□□□ 1
ZNF563Q8TA94 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.32■■□□□ 1
ZNF563Q8TA94 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZNF563Q8TA94 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZNF563Q8TA94 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.32■■□□□ 1
ZNF563Q8TA94 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF563Q8TA94 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 AC019171.1-201ENST00000601251 1056 ntBASIC21.31■■□□□ 1
ZNF563Q8TA94 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF563Q8TA94 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF563Q8TA94 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.3■■□□□ 1
ZNF563Q8TA94 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF563Q8TA94 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF563Q8TA94 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.3■■□□□ 1
ZNF563Q8TA94 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.3■■□□□ 1
ZNF563Q8TA94 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.3■■□□□ 1
ZNF563Q8TA94 AC010980.1-201ENST00000587192 1142 ntBASIC21.3■■□□□ 1
ZNF563Q8TA94 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF563Q8TA94 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.3■■□□□ 1
ZNF563Q8TA94 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF563Q8TA94 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 LINC01124-201ENST00000409786 2117 ntBASIC21.29■■□□□ 1
ZNF563Q8TA94 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.29■■□□□ 1
ZNF563Q8TA94 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.29■■□□□ 1
ZNF563Q8TA94 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF563Q8TA94 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZNF563Q8TA94 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF563Q8TA94 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.28■■□□□ 1
ZNF563Q8TA94 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.28■■□□□ 1
ZNF563Q8TA94 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF563Q8TA94 AC090877.2-201ENST00000558441 1738 ntBASIC21.28■■□□□ 1
ZNF563Q8TA94 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF563Q8TA94 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
ZNF563Q8TA94 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.28■■□□□ 1
ZNF563Q8TA94 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF563Q8TA94 AC022616.5-201ENST00000518796 181 ntBASIC21.27■■□□□ 1
ZNF563Q8TA94 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ZNF563Q8TA94 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.27■■□□□ 1
ZNF563Q8TA94 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ZNF563Q8TA94 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF563Q8TA94 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms