Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 NTF6A-201ENST00000591175 560 ntBASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF439Q8NDP4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF439Q8NDP4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF439Q8NDP4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF439Q8NDP4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 LINC01124-201ENST00000409786 2117 ntBASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF439Q8NDP4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF439Q8NDP4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF439Q8NDP4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 LONRF2P2-201ENST00000439212 571 ntBASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF439Q8NDP4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.14■□□□□ 0.66
ZNF439Q8NDP4 LINC00543-201ENST00000567234 1845 ntBASIC19.14■□□□□ 0.65
ZNF439Q8NDP4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF439Q8NDP4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF439Q8NDP4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF439Q8NDP4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF439Q8NDP4 AC141586.4-201ENST00000624558 1573 ntBASIC19.13■□□□□ 0.65
ZNF439Q8NDP4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF439Q8NDP4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF439Q8NDP4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZNF439Q8NDP4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms