Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC29.05■■■□□ 2.24
SMC5Q8IY18 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC29.05■■■□□ 2.24
SMC5Q8IY18 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.05■■■□□ 2.24
SMC5Q8IY18 AC129492.7-201ENST00000622992 756 ntBASIC29.05■■■□□ 2.24
SMC5Q8IY18 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SMC5Q8IY18 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
SMC5Q8IY18 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.04■■■□□ 2.24
SMC5Q8IY18 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.04■■■□□ 2.24
SMC5Q8IY18 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
SMC5Q8IY18 KRT18P60-201ENST00000312876 1297 ntBASIC29.03■■■□□ 2.24
SMC5Q8IY18 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SMC5Q8IY18 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SMC5Q8IY18 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMC5Q8IY18 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMC5Q8IY18 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMC5Q8IY18 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.01■■■□□ 2.24
SMC5Q8IY18 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC29.01■■■□□ 2.24
SMC5Q8IY18 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMC5Q8IY18 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.01■■■□□ 2.23
SMC5Q8IY18 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMC5Q8IY18 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMC5Q8IY18 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
SMC5Q8IY18 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
SMC5Q8IY18 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMC5Q8IY18 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMC5Q8IY18 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMC5Q8IY18 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29■■■□□ 2.23
SMC5Q8IY18 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29■■■□□ 2.23
SMC5Q8IY18 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMC5Q8IY18 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29■■■□□ 2.23
SMC5Q8IY18 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SMC5Q8IY18 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.99■■■□□ 2.23
SMC5Q8IY18 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
SMC5Q8IY18 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.99■■■□□ 2.23
SMC5Q8IY18 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
SMC5Q8IY18 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.99■■■□□ 2.23
SMC5Q8IY18 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
SMC5Q8IY18 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
SMC5Q8IY18 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.98■■■□□ 2.23
SMC5Q8IY18 LONRF2P2-201ENST00000439212 571 ntBASIC28.98■■■□□ 2.23
SMC5Q8IY18 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SMC5Q8IY18 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
SMC5Q8IY18 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.97■■■□□ 2.23
SMC5Q8IY18 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
SMC5Q8IY18 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
SMC5Q8IY18 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SMC5Q8IY18 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SMC5Q8IY18 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SMC5Q8IY18 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
SMC5Q8IY18 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SMC5Q8IY18 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
SMC5Q8IY18 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
SMC5Q8IY18 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SMC5Q8IY18 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
SMC5Q8IY18 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.96■■■□□ 2.23
SMC5Q8IY18 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.96■■■□□ 2.23
SMC5Q8IY18 AC090877.2-201ENST00000558441 1738 ntBASIC28.96■■■□□ 2.23
SMC5Q8IY18 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SMC5Q8IY18 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.95■■■□□ 2.23
SMC5Q8IY18 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SMC5Q8IY18 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SMC5Q8IY18 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
SMC5Q8IY18 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SMC5Q8IY18 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
SMC5Q8IY18 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SMC5Q8IY18 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
SMC5Q8IY18 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SMC5Q8IY18 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
SMC5Q8IY18 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SMC5Q8IY18 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SMC5Q8IY18 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMC5Q8IY18 ABCB10P4-201ENST00000566803 2184 ntBASIC28.94■■■□□ 2.22
SMC5Q8IY18 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SMC5Q8IY18 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.94■■■□□ 2.22
SMC5Q8IY18 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.93■■■□□ 2.22
SMC5Q8IY18 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
SMC5Q8IY18 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
SMC5Q8IY18 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SMC5Q8IY18 AL592295.1-201ENST00000400984 884 ntBASIC28.93■■■□□ 2.22
SMC5Q8IY18 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.93■■■□□ 2.22
SMC5Q8IY18 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.93■■■□□ 2.22
SMC5Q8IY18 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SMC5Q8IY18 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.92■■■□□ 2.22
SMC5Q8IY18 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SMC5Q8IY18 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
SMC5Q8IY18 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.92■■■□□ 2.22
SMC5Q8IY18 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SMC5Q8IY18 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMC5Q8IY18 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMC5Q8IY18 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.91■■■□□ 2.22
SMC5Q8IY18 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMC5Q8IY18 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMC5Q8IY18 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
SMC5Q8IY18 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.9■■■□□ 2.22
SMC5Q8IY18 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMC5Q8IY18 ABHD17AP5-201ENST00000580133 923 ntBASIC28.9■■■□□ 2.22
SMC5Q8IY18 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMC5Q8IY18 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
SMC5Q8IY18 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMC5Q8IY18 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.89■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms