Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SFR1Q86XK3 AC090877.2-201ENST00000558441 1738 ntBASIC25.88■■□□□ 1.73
SFR1Q86XK3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SFR1Q86XK3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SFR1Q86XK3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SFR1Q86XK3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.87■■□□□ 1.73
SFR1Q86XK3 AC022616.5-201ENST00000518796 181 ntBASIC25.87■■□□□ 1.73
SFR1Q86XK3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.87■■□□□ 1.73
SFR1Q86XK3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
SFR1Q86XK3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SFR1Q86XK3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SFR1Q86XK3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SFR1Q86XK3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SFR1Q86XK3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.86■■□□□ 1.73
SFR1Q86XK3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SFR1Q86XK3 AC135731.1-201ENST00000569415 2548 ntBASIC25.85■■□□□ 1.73
SFR1Q86XK3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.85■■□□□ 1.73
SFR1Q86XK3 MIR4508-201ENST00000584178 70 ntBASIC25.85■■□□□ 1.73
SFR1Q86XK3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SFR1Q86XK3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SFR1Q86XK3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.85■■□□□ 1.73
SFR1Q86XK3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.84■■□□□ 1.73
SFR1Q86XK3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SFR1Q86XK3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SFR1Q86XK3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SFR1Q86XK3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.83■■□□□ 1.73
SFR1Q86XK3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.83■■□□□ 1.73
SFR1Q86XK3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SFR1Q86XK3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
SFR1Q86XK3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.83■■□□□ 1.72
SFR1Q86XK3 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.83■■□□□ 1.72
SFR1Q86XK3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SFR1Q86XK3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SFR1Q86XK3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.82■■□□□ 1.72
SFR1Q86XK3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.82■■□□□ 1.72
SFR1Q86XK3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SFR1Q86XK3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SFR1Q86XK3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
SFR1Q86XK3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
SFR1Q86XK3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.81■■□□□ 1.72
SFR1Q86XK3 AC120024.1-201ENST00000562672 995 ntBASIC25.81■■□□□ 1.72
SFR1Q86XK3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SFR1Q86XK3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SFR1Q86XK3 HLA-L-211ENST00000482052 1765 ntBASIC25.8■■□□□ 1.72
SFR1Q86XK3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.8■■□□□ 1.72
SFR1Q86XK3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.8■■□□□ 1.72
SFR1Q86XK3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SFR1Q86XK3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.8■■□□□ 1.72
SFR1Q86XK3 AC011551.1-201ENST00000614101 683 ntBASIC25.8■■□□□ 1.72
SFR1Q86XK3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SFR1Q86XK3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SFR1Q86XK3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.79■■□□□ 1.72
SFR1Q86XK3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SFR1Q86XK3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SFR1Q86XK3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SFR1Q86XK3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.79■■□□□ 1.72
SFR1Q86XK3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.78■■□□□ 1.72
SFR1Q86XK3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.78■■□□□ 1.72
SFR1Q86XK3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SFR1Q86XK3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SFR1Q86XK3 YBX1P4-201ENST00000392794 808 ntBASIC25.77■■□□□ 1.72
SFR1Q86XK3 LINC01124-201ENST00000409786 2117 ntBASIC25.77■■□□□ 1.72
SFR1Q86XK3 AC103724.3-201ENST00000564481 992 ntBASIC25.77■■□□□ 1.72
SFR1Q86XK3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
SFR1Q86XK3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SFR1Q86XK3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.77■■□□□ 1.72
SFR1Q86XK3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SFR1Q86XK3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SFR1Q86XK3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SFR1Q86XK3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.76■■□□□ 1.71
SFR1Q86XK3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SFR1Q86XK3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SFR1Q86XK3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SFR1Q86XK3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.75■■□□□ 1.71
SFR1Q86XK3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.75■■□□□ 1.71
SFR1Q86XK3 KRT18P24-201ENST00000344739 1156 ntBASIC25.75■■□□□ 1.71
SFR1Q86XK3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SFR1Q86XK3 THA1P-201ENST00000590384 1145 ntBASIC25.75■■□□□ 1.71
SFR1Q86XK3 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.75■■□□□ 1.71
SFR1Q86XK3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SFR1Q86XK3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SFR1Q86XK3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SFR1Q86XK3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SFR1Q86XK3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.74■■□□□ 1.71
SFR1Q86XK3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SFR1Q86XK3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SFR1Q86XK3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SFR1Q86XK3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.74■■□□□ 1.71
SFR1Q86XK3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SFR1Q86XK3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.73■■□□□ 1.71
SFR1Q86XK3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SFR1Q86XK3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SFR1Q86XK3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.72■■□□□ 1.71
SFR1Q86XK3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms