Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3HC1Q86WB0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 AC018755.3-202ENST00000596210 929 ntBASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3HC1Q86WB0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
ZC3HC1Q86WB0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3HC1Q86WB0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3HC1Q86WB0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.21■■□□□ 1.31
ZC3HC1Q86WB0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.21■■□□□ 1.31
ZC3HC1Q86WB0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 RARRES2P2-201ENST00000394842 485 ntBASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3HC1Q86WB0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZC3HC1Q86WB0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZC3HC1Q86WB0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZC3HC1Q86WB0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
ZC3HC1Q86WB0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
ZC3HC1Q86WB0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
ZC3HC1Q86WB0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.17■■□□□ 1.3
ZC3HC1Q86WB0 AC087393.1-201ENST00000582896 145 ntBASIC23.17■■□□□ 1.3
ZC3HC1Q86WB0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3HC1Q86WB0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZC3HC1Q86WB0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 DUX4L9-201ENST00000449051 1259 ntBASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
ZC3HC1Q86WB0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 HSD17B1P1-201ENST00000590052 955 ntBASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 MIR6765-201ENST00000614092 87 ntBASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZC3HC1Q86WB0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.14■■□□□ 1.3
ZC3HC1Q86WB0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZC3HC1Q86WB0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3HC1Q86WB0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ZC3HC1Q86WB0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3HC1Q86WB0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
ZC3HC1Q86WB0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.14■■□□□ 1.29
ZC3HC1Q86WB0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 U85056.1-201ENST00000616429 682 ntBASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3HC1Q86WB0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms