Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 PVT1_1.1-201ENST00000615125 194 ntBASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.55■■□□□ 1.2
PRAMEF9Q5VWM5 LINC00543-201ENST00000567234 1845 ntBASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRAMEF9Q5VWM5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 TSPY13P-201ENST00000338964 914 ntBASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 AL592295.1-201ENST00000400984 884 ntBASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.53■■□□□ 1.2
PRAMEF9Q5VWM5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRAMEF9Q5VWM5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRAMEF9Q5VWM5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.51■■□□□ 1.19
PRAMEF9Q5VWM5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRAMEF9Q5VWM5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.51■■□□□ 1.19
PRAMEF9Q5VWM5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRAMEF9Q5VWM5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRAMEF9Q5VWM5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 AC019171.1-201ENST00000601251 1056 ntBASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 AC090877.2-201ENST00000558441 1738 ntBASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRAMEF9Q5VWM5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 AL033527.3-201ENST00000566366 1196 ntBASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 AC012354.3-201ENST00000623734 483 ntBASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRAMEF9Q5VWM5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 AC139795.1-202ENST00000500444 432 ntBASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 AC004812.2-201ENST00000611079 2094 ntBASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRAMEF9Q5VWM5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.47■■□□□ 1.19
PRAMEF9Q5VWM5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 AC010980.1-201ENST00000587192 1142 ntBASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.46■■□□□ 1.19
PRAMEF9Q5VWM5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PRAMEF9Q5VWM5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms